Unfortunately, we have identified issues with files from a small number of APPRIS datasets. In each affected dataset, the relevant files have been deleted and a README file has been added to explain the changes. The issues affecting these datasets are outlined below.
Please contact us if you are affected by the issues with these files or their deletion, or you are interested in obtaining updated APPRIS predictions for any of these datasets. As always, we recommend using the most up-to-date APPRIS predictions that are available for a given species.
2019_09.v29/danio_rerio/e98v29
In this dataset, there are two copies of each 'appris_method' file, and the older copy of each file is empty. The older version of each 'appris_method' file has been deleted, leaving the newer version intact. A new bigBed file has been generated for each BED12 file.
2018_12.v28/homo_sapiens/e94v28
In this dataset, the 'appris_method' files have been deleted due to invalid/duplicated records.
2018_12.v28/mus_musculus/e94v28
The 'appris_method' files have been deleted from this dataset due to invalid/duplicated records.
2018_12.v28/homo_sapiens/rs109v28
The 'appris_data' files have been deleted from this dataset due to duplicated records.
2018_07.v27/gallus_gallus/e93
All
files have been deleted from this dataset. The 'appris_data' files
contained duplicated records, and the 'appris_method' files lacked data
for the Z and W sex chromosomes.
2017_06.v23/homo_sapiens/e88v22
A small number of extraneous files have been removed from this dataset.
2017_06.v23/homo_sapiens/rs107v22
A small number of extraneous files have been removed from this dataset.
2017_06.v23/mus_musculus/up201610v23
The file 'appris_data.appris_label.txt' has been removed from this dataset due to apparent file corruption.
